Step-by-step guide to onboarding a bookkeeper and keeping controls tight

Step-by-step guide to onboarding a bookkeeper and keeping controls tight

I remember the first time a new client asked me to recommend a bookkeeper. They were overwhelmed—but also relieved to hand over day-to-day bookkeeping. What many small business owners don’t realise is that finding someone who’s technically capable is only part of the job. The other part—arguably the harder one—is onboarding them properly and putting controls in place so your finances stay accurate and secure.

Below I’ll walk you through a practical, step-by-step approach I use with clients at Quinnaccountants Co to bring a bookkeeper into a small UK business and keep controls tight. This isn’t theoretical: it’s drawn from real errors I’ve helped fix (duplicate invoices, lost receipts, missing bank reconciliations) and from setups that worked well (clean records, dependable cashflow forecasting, and easy month-end routines).

Define the scope and expectations before you start

Before you interview candidates or invite freelancers onto your accounting software, get very clear on what you want them to do. I ask clients to write a short brief covering:

  • Core tasks (sales invoicing, purchase entries, bank reconciliations, VAT returns)
  • Frequency (daily data entry, weekly reconciliations, monthly reports)
  • Who signs off work (owner, director, or accountant?)
  • Communication preferences (email, Slack, Teams) and response times
  • Access needs (bank feeds, Xero/MYOB/QuickBooks, payroll systems)
  • Having this written down helps avoid scope creep and makes it easier to compare candidates fairly.

    Choose the right type of bookkeeper

    There are different models and each suits different businesses:

  • Freelance/contract bookkeeper—good for flexibility, often cost-effective.
  • Bookkeeping practice—offers continuity and cover for sickness, usually with set processes.
  • In-house employee—best if you need someone onsite for physical receipts or direct interactions.
  • When I advise clients, I consider transaction volume, complexity (e.g. multiple sales channels), and the need for physical presence. For many micro businesses, a skilled freelance bookkeeper using cloud tools like Xero or QuickBooks Online is a sweet spot.

    Interview questions that matter

    Beyond “what experience do you have?” ask these targeted questions:

  • Which accounting packages are you certified in?
  • How do you handle bank reconciliations and what turnaround time do you aim for?
  • Can you describe a mistake you found and how you corrected it?
  • How do you manage receipts—paper, scanned, or app-based?
  • How do you secure client data and what are your backup practices?
  • Look for candidates who ask good questions back about your business—those are the ones attentive to nuance.

    Prepare your systems before granting access

    Too often I see owners rush to hand over admin privileges. Take these preparatory steps first:

  • Set up a dedicated business email for bookkeeping and financial communications (e.g. [email protected]).
  • Enable two-factor authentication (2FA) on cloud accounting subscriptions and bank logins where available.
  • Review your chart of accounts—simplify it if needed so reports are meaningful.
  • Create a clear folder structure for digital documents (HMRC correspondence, VAT records, supplier invoices).
  • A tidy system reduces errors and makes onboarding faster.

    Access control: give just enough permissions

    Least-privilege access is a basic control. Don’t give full admin unless absolutely necessary. Typical roles I grant:

  • Bank feeds and reconciliation rights but no bank payment authority.
  • Create and edit invoices, but only certain users can approve or send to customers.
  • Access to payroll data only if the bookkeeper is doing payroll tasks.
  • Access Recommended Notes
    Accounting software admin No Reserve for owner or accountant
    Bank feed and reconciliation Yes No payment initiation
    Invoice creation Yes Sending may require approval
    Payroll Only if needed Prefer separate payroll admin

    Create a clear onboarding checklist and timeline

    I give new clients a checklist that the bookkeeper, business owner and accountant sign off on. Key items include:

  • Initial data clean-up: import opening balances and past bank statements.
  • Connect bank feeds and confirm the feed is reconciling properly.
  • Set at least two reporting templates (monthly P&L and cashflow snapshot).
  • Agree a schedule for recurring tasks and month-end dates.
  • Set a communication cadence (weekly updates, monthly review call).
  • Timelines: expect 2–4 weeks for a competent bookkeeper to get fully up to speed for a standard micro business. More complex businesses take longer.

    Agree quality checks and reconciliation routines

    Controls mean routines that are easy to follow:

  • Bank reconciliation frequency (I recommend weekly for active accounts).
  • Statement matching and older uncleared items review (monthly).
  • Supplier statement reconciliations quarterly for key suppliers.
  • VAT review before submission—bookkeeper prepares, owner or accountant signs off.
  • Document these in a simple SOP (standard operating procedure). When something deviates, the bookkeeper should flag it immediately.

    Secure documentation and receipts

    Receipt loss is a common source of errors and missing VAT claims. I encourage clients to adopt a single approach:

  • Use a receipts app like Receipt Bank/Dext or Xero Expenses for scans.
  • Set naming conventions and retention periods (HMRC requires VAT records for 6 years in most cases).
  • Keep a small physical file for anything that HMRC may insist on original copies for.
  • Set clear communication and escalation paths

    Decide who the bookkeeper escalates to for queries. Typical flow:

  • Day-to-day queries → Business owner or office manager
  • Complex tax or statutory questions → Accountant (that’s often me)
  • Suspicious transactions or fraud alerts → Owner immediately and bank if needed
  • Agree response SLAs—e.g. urgent items within 24 hours, routine queries within 3 working days.

    Monitor performance with a small set of KPIs

    You don’t need dozens of metrics. Track a few that show the bookkeeping is working and controls are in place:

  • Bank reconciliations up-to-date (percentage current this month)
  • Number of unreconciled transactions older than 30/60/90 days
  • Time taken to resolve supplier/customer queries
  • VAT submission accuracy and timeliness
  • I build a simple dashboard for clients in Xero or Google Sheets so these numbers are visible each month.

    Plan regular reviews and continuous improvement

    Bookkeeping isn’t “set and forget.” Schedule quarterly reviews for process improvements—automation of bank rules, better supplier coding, or tighter control on petty cash. Encourage bookkeepers to suggest efficiencies: they often have the best ideas for workflow wins.

    Finally, treat your bookkeeper as a partner. Clear processes, sensible permissions, and regular communication keep your accounts accurate and reduce risk. When I see businesses with tidy books and strong controls, they spend far less time firefighting and more time making decisions based on reliable numbers—exactly the outcome I aim for with my clients.


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